Research workbench
Structure of sugar modified epidermal growth factor-like repeat 12 of mouse notch-1 receptor
Analyse Structure of sugar modified epidermal growth factor-like repeat 12 of mouse… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2RQZ
- Type
- protein
- Length
- 38 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Neurogenic locus notch homolog protein 1
- UniProt
- Q01705
- Ligands
- FUC, NAG
Structure
solution nmr · 1 distinct chain · 0% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Neurogenic locus notch homolog protein 1 | protein | 38 | 0% helix, 21% strand | Q01705 |
Ligands and binding sites
- FUC · alpha-L-fucopyranose · sugar · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 disulfide, 1 glycan (disulfide, O-glycosylation).
Compared structures
- 2RQZ · Structure of sugar modified epidermal growth factor-like repeat 12 of mouse Notch-1… · the same entry in another collection · chain A against A, TM-score 1.00
- Q01705 · AlphaFold monomer V2.0 prediction for neurogenic locus notch homolog protein 1 (Q01705) · a predicted model of the same protein · chain A against A, TM-score 0.62
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q01705
- Elsewhere: RCSB PDB 2RQZ · PDBe 2RQZ · UniProt Q01705
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