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Truncated EGF-a

Analyse Truncated EGF-a in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2MG9
Type: protein
Length: 26 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Low-density lipoprotein receptor
UniProt: P01130
Ligands: CA, NH2

Structure

solution nmr · 1 distinct chain · 15% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Low-density lipoprotein receptor	protein	26	15% helix, 23% strand	P01130

Ligands and binding sites

CA · Calcium ion · metal · chains A
NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2MG9 · Truncated EGF-A · the same entry in another collection · chain A against A, TM-score 1.00
P01130 · AlphaFold monomer V2.0 prediction for low-density lipoprotein receptor (P01130) · a predicted model of the same protein · chain A against A, TM-score 0.79

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01130
Elsewhere: RCSB PDB 2MG9 · PDBe 2MG9 · UniProt P01130

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