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Crystal structure of the rgs-homologous domain of axin

Analyse Crystal structure of the rgs-homologous domain of axin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1DK8
Type: protein
Length: 147 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Axin
UniProt: O15169
Ligands: SO4

Structure

x-ray diffraction · 1 distinct chain · 67% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Axin	protein	147	67% helix, 0% strand	O15169

Ligands and binding sites

SO4 · Sulfate ion · ion · 6 copies · chains A
GOL · Glycerol · additive · 5 copies · chains A
DTT · 2,3-dihydroxy-1,4-dithiobutane · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

1DK8 · Crystal structure of the rgs-homologous domain of axin · the same entry in another collection · chain A against A, TM-score 1.00
O15169 · AlphaFold monomer V2.0 prediction for axin-1 (O15169) · a predicted model of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O15169
Elsewhere: RCSB PDB 1DK8 · PDBe 1DK8 · UniProt O15169

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