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Solution structure of polypyrimidine tract binding protein RBD2 complexed with cucucu RNA
Analyse Solution structure of polypyrimidine tract binding protein RBD2 complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2ADB
- Type
- protein + RNA
- Length
- 133 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*CP*UP*CP*UP*CP*U)-3'; Polypyrimidine tract-binding protein 1
- UniProt
- P26599
Structure
solution nmr · 2 distinct chains · 17% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | 5'-R(*CP*UP*CP*UP*CP*U)-3' | rna | 6 | — | — |
| A | Polypyrimidine tract-binding protein 1 | protein | 127 | 17% helix, 23% strand | P26599 |
Interfaces
1 interface between chains.
- B–A · 669 Ų buried · 17 hydrogen bonds · protein-nucleic
Compared structures
- 2ADB · Solution structure of Polypyrimidine Tract Binding protein RBD2 complexed with CUCUCU RNA · the same entry in another collection · chain B against B, TM-score 1.00
- P26599 · AlphaFold monomer V2.0 prediction for polypyrimidine tract-binding protein 1 (P26599) · a predicted model of the same protein · chain A against A, TM-score 0.69
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26599
- Elsewhere: RCSB PDB 2ADB · PDBe 2ADB · UniProt P26599
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