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Trypsin inhibitor in complex with bovine trypsin variant X(SSYI)BT.A4

Analyse Trypsin inhibitor in complex with bovine trypsin variant X(SSYI)BT.A4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1V2P
Type
protein
Length
223 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Trypsin
EC
3.4.21.4
UniProt
P00760
Ligands
ANH, CA, SO4

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
TTrypsin (EC 3.4.21.4)protein22310% helix, 35% strandP00760

Ligands and binding sites

  • ANH · Methyl N-[(4-methylphenyl)sulfonyl]glycyl-3-[amino(imino)methyl]-D-phenylalaninate · ligand · chains T
  • CA · Calcium ion · metal · chains T
  • SO4 · Sulfate ion · ion · chains T

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 1V2P · Trypsin inhibitor in complex with bovine trypsin variant X(SSYI)bT.A4 · the same entry in another collection · chain T against T, TM-score 1.00
  • 1TNH · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99
  • 1TNL · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99
  • 1TNI · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99
  • 1TNJ · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99
  • 1TNG · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99
  • 1TNK · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain T against A, TM-score 0.99

Analyse

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