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NMR, representative structure

Analyse NMR, representative structure in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1QM9
Type: protein
Length: 198 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polypyrimidine tract-binding protein
UniProt: P26599
Pockets: 4 · best druggability 0.52

Structure

solution nmr · 1 distinct chain · 21% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polypyrimidine tract-binding protein	protein	198	21% helix, 17% strand	P26599

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	301	0.52	0.74	31	empty
2	213	0.49	0.76	26	empty
3	93	0.38	0.76	18	empty
4	59	0.28	0.74	15	empty

Compared structures

1QM9 · NMR, representative structure · the same entry in another collection · chain A against A, TM-score 1.00
P26599 · AlphaFold monomer V2.0 prediction for polypyrimidine tract-binding protein 1 (P26599) · a predicted model of the same protein · chain A against A, TM-score 0.48

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26599
Elsewhere: RCSB PDB 1QM9 · PDBe 1QM9 · UniProt P26599

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