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HTAFII18/HTAFII28 heterodimer crystal structure with bound pcmbs

Analyse HTAFII18/HTAFII28 heterodimer crystal structure with bound pcmbs in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1BH9
Type
protein
Length
134 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
TAFII18; TAFII28
UniProt
Q15543, Q15544
Ligands
PMB

Structure

x-ray diffraction · 2 distinct chains · 74% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATAFII18protein4576% helix, 0% strandQ15543
BTAFII28protein8973% helix, 0% strandQ15544

Ligands and binding sites

  • PMB · Para-mercury-benzenesulfonic acid · ligand · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1647 Ų buried · 6 hydrogen bonds · protein-protein

Compared structures

  • 1BH9 · HTAFII18/HTAFII28 heterodimer crystal structure with bound pcmbs · the same entry in another collection · chain A against A, TM-score 1.00
  • Q15544 · AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid subunit 11… · a predicted model of the same protein · chain B against A, TM-score 0.95
  • Q15543 · AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid subunit 13… · a predicted model of the same protein · chain A against A, TM-score 0.93

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