Research workbench
Solution structure of T-cell surface glycoprotein CD8 alpha chain and proto-oncogene tyrosine-protein kinase lck fragments
Analyse Solution structure of T-cell surface glycoprotein CD8 alpha chain and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1Q69
- Type
- protein
- Length
- 48 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- T-cell surface glycoprotein CD8 alpha chain; Proto-oncogene tyrosine-protein kinase lck
- UniProt
- P01732, P06239
- Ligands
- ZN
Structure
solution nmr · 2 distinct chains · 0% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | T-cell surface glycoprotein CD8 alpha chain | protein | 19 | 0% helix, 0% strand | P01732 |
| B | Proto-oncogene tyrosine-protein kinase lck | protein | 29 | 0% helix, 14% strand | P06239 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 261 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 1Q69 · Solution structure of T-cell surface glycoprotein CD8 alpha chain and Proto-oncogene… · the same entry in another collection · chain A against A, TM-score 1.00
- P06239 · AlphaFold monomer V2.0 prediction for tyrosine-protein kinase lck (P06239) · a predicted model of the same protein · chain B against A, TM-score 0.34
- P01732 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD8 alpha chain (P01732) · a predicted model of the same protein · chain A against A, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01732
- Every structure of UniProt P06239
- Elsewhere: RCSB PDB 1Q69 · PDBe 1Q69 · UniProt P01732 · UniProt P06239
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