Research workbench
Tra module of NUA4
Analyse Tra module of NUA4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7VVY
- Type
- protein
- Length
- 5,205 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q06337, P80428, P60010, P53201, P43572, P38811
- Ligands
- ATP, MG
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 415 | — | Q06337 |
| F | — | protein | 414 | — | P80428 |
| G | — | protein | 357 | — | P60010 |
| K | — | protein | 237 | — | P53201 |
| H | — | protein | 269 | — | P43572 |
| L | — | protein | 3513 | — | P38811 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains F, G
- MG · Magnesium ion · metal · 2 copies · chains F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VVY · TRA module of NuA4 · the same entry in another collection · chain H against H, TM-score 1.00
- P80428 · AlphaFold monomer V2.0 prediction for actin-related protein 4 (P80428) · a predicted model of the same protein · chain F against A, TM-score 0.98
- P60010 · AlphaFold monomer V2.0 prediction for actin (P60010) · a predicted model of the same protein · chain G against A, TM-score 0.97
- P53201 · AlphaFold monomer V2.0 prediction for SWR1-complex protein 4 (P53201) · a predicted model of the same protein · chain K against A, TM-score 0.51
- Q06337 · AlphaFold monomer V2.0 prediction for chromatin modification-related protein EAF1 (Q06337) · a predicted model of the same protein · chain E against A, TM-score 0.35
- P43572 · AlphaFold monomer V2.0 prediction for enhancer of polycomb-like protein 1 (P43572) · a predicted model of the same protein · chain H against A, TM-score 0.30
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q06337
- Every structure of UniProt P80428
- Every structure of UniProt P60010
- Every structure of UniProt P53201
- Every structure of UniProt P43572
- Every structure of UniProt P38811
- Elsewhere: RCSB PDB 7VVY · PDBe 7VVY · UniProt Q06337 · UniProt P80428 · UniProt P60010 · UniProt P53201 · UniProt P43572 · UniProt P38811
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