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Full-length insulin receptor bound with unsaturated insulin wt (2 insulin bound) symmetric conformation

Analyse Full-length insulin receptor bound with unsaturated insulin wt (2 insulin… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7STH
Type
protein
Length
1,736 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Insulin receptor; Insulin
EC
2.7.10.1
UniProt
P15208, P01308
Pockets
16 · best druggability 0.76

Structure

electron microscopy · 2 distinct chains · 13% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BInsulin receptor (EC 2.7.10.1)protein82012% helix, 30% strandP15208
C, DInsulinprotein4842% helix, 4% strandP01308

Pockets

16 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
17310.760.8173empty
28850.760.7974empty
33210.740.8646empty
43620.620.7834empty
53620.600.7736empty

Interfaces

5 interfaces between chains.

  • A–B · 3064 Ų buried · 26 hydrogen bonds · protein-protein
  • A–D · 848 Ų buried · 11 hydrogen bonds · protein-protein
  • B–C · 836 Ų buried · 12 hydrogen bonds · protein-protein
  • B–D · 441 Ų buried · 5 hydrogen bonds · protein-protein
  • A–C · 441 Ų buried · 4 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 40 disulfide (disulfide).

Compared structures

  • 7STH · Full-length insulin receptor bound with unsaturated insulin WT (2 insulin bound)… · the same entry in another collection · chain A against A, TM-score 1.00
  • P15208 · AlphaFold monomer V2.0 prediction for insulin receptor (P15208) · a predicted model of the same protein · chain A against A, TM-score 0.49

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