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Importin ALPHA2 in complex with P50 nls

Analyse Importin ALPHA2 in complex with P50 nls in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7RG4
Type
protein
Length
434 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Importin subunit alpha-1; Isoform 3 of nuclear factor nf-kappa-B P105 subunit
UniProt
P52293, P19838
Pockets
1 · best druggability 0.46

Structure

x-ray diffraction · 2 distinct chains · 71% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
EImportin subunit alpha-1protein42772% helix, 0% strandP52293
BIsoform 3 of nuclear factor nf-kappa-B P105 subunitprotein70% helix, 0% strandP19838

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1700.460.8213empty

Interfaces

1 interface between chains.

  • E–B · 722 Ų buried · 18 hydrogen bonds · protein-protein

Compared structures

  • 7RG4 · Importin alpha2 in complex with p50 NLS · the same entry in another collection · chain E against E, TM-score 1.00
  • P19838 · AlphaFold monomer V2.0 prediction for nuclear factor nf-kappa-B P105 subunit (P19838) · a predicted model of the same protein · chain B against A, TM-score 0.59

Analyse

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