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Crystal structure of nampt bound to ligand TSY535(COMPOUND 9A)

Analyse Crystal structure of nampt bound to ligand TSY535(COMPOUND 9A) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7Q8T
Type
protein
Length
930 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q99KQ4
Ligands
9IY, SO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein465—Q99KQ4

Ligands and binding sites

  • 9IY · [(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[4-[[[4-(phenylsulfonyl) phenyl]carbamoylamino]methyl]phenyl]oxolan-2-yl]methyl dihydrogen phosphate · ligand · 2 copies · chains A, B
  • SO4 · Sulfate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7Q8T · Crystal structure of NAMPT bound to ligand TSY535(compound 9a) · the same entry in another collection · chain A against A, TM-score 1.00
  • Q99KQ4 · AlphaFold monomer V2.0 prediction for nicotinamide phosphoribosyltransferase (Q99KQ4) · a predicted model of the same protein · chain A against A, TM-score 0.99

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