Research workbench
The third PDZ domain from the synaptic protein psd-95 in complex with a C-terminal peptide derived from cript.
Analyse The third PDZ domain from the synaptic protein psd-95 in complex with a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1BE9
- Type
- protein
- Length
- 120 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Psd-95; Cript
- UniProt
- P31016
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Psd-95 | protein | 115 | 19% helix, 34% strand | P31016 |
| B | Cript | protein | 5 | 0% helix, 60% strand | — |
Interfaces
1 interface between chains.
- A–B · 411 Ų buried · 12 hydrogen bonds · protein-protein
Compared structures
- 1BE9 · The third PDZ domain from the synaptic protein psd-95 in complex with a C-terminal… · the same entry in another collection · chain A against A, TM-score 1.00
- P31016 · AlphaFold monomer V2.0 prediction for disks large homolog 4 (P31016) · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31016
- Elsewhere: RCSB PDB 1BE9 · PDBe 1BE9 · UniProt P31016
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