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Bacterial 30S ribosomal subunit assembly complex state a (consensus refinement)

Analyse Bacterial 30S ribosomal subunit assembly complex state a (consensus refinement) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7NAT
Type
protein + RNA
Length
3,992 residues
Chains
22
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A7V0, P0A7V3, P0A7V8, P0A7W1, P02358, P02359, P0A7W7, P0A7X3, P0A7R5, P0A7R9, P0A7S3, P0A7S9, P0AG59, P0ADZ4, P0A7T3, P0AG63, P0A7T7, P0A7U3, P0A7U7, P68679, P0A8A8
Ligands
MG, ZN

Structure

electron microscopy · 22 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—rna1430——
B—protein224—P0A7V0
C—protein211—P0A7V3
D—protein205—P0A7V8
E—protein156—P0A7W1
F—protein106—P02358
G—protein151—P02359
H—protein129—P0A7W7
I—protein127—P0A7X3
J—protein99—P0A7R5
K—protein117—P0A7R9
L—protein123—P0A7S3
M—protein114—P0A7S9
N—protein100—P0AG59
O—protein88—P0ADZ4
P—protein82—P0A7T3
Q—protein80—P0AG63
R—protein65—P0A7T7
S—protein82—P0A7U3
T—protein86—P0A7U7
U—protein66—P68679
X—protein151—P0A8A8

Ligands and binding sites

  • MG · Magnesium ion · metal · 65 copies · chains A, K, P, N, C
  • ZN · Zinc ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7NAT · Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement) · the same entry in another collection · chain X against X, TM-score 1.00

Analyse

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