Research workbench

Ghrp-6-bound ghrelin receptor in complex with gq

Analyse Ghrp-6-bound ghrelin receptor in complex with gq in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7F9Z
Type: protein
Length: 1,270 residues
Chains: 7
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P62873, P59768
Ligands: NH2

Structure

electron microscopy · 7 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	228	—	—
B	—	protein	338	—	P62873
C	—	protein	6	—	—
E	—	protein	231	—	—
G	—	protein	57	—	P59768
N	—	protein	128	—	—
R	—	protein	282	—	—

Ligands and binding sites

NH2 · Amino group · ion · chains C, R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7F9Z · GHRP-6-bound ghrelin receptor in complex with Gq · the same entry in another collection · chain R against R, TM-score 1.00
P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62873
Every structure of UniProt P59768
Elsewhere: RCSB PDB 7F9Z · PDBe 7F9Z · UniProt P62873 · UniProt P59768

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