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Structure of TRPC3 at 2.7 ångström in high calcium state

Analyse Structure of TRPC3 at 2.7 ångström in high calcium state in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7DXB
Type: protein
Length: 2,952 residues
Chains: 4
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q13507
Ligands: Y01, POV, 98R, CA, ZN

Structure

electron microscopy · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	—	protein	738	—	Q13507

Ligands and binding sites

Y01 · Cholesterol hemisuccinate · ligand · 8 copies · chains A, B, C, D
POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate · ligand · 4 copies · chains A, B, D, C
98R · [(2S)-2-[(E)-octadec-10-enoyl]oxy-3-oxidanyl-propyl] octadec-10-enoate · ligand · 4 copies · chains A, D, B, C
CA · Calcium ion · metal · 12 copies · chains A, B, C, D
ZN · Zinc ion · metal · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7DXB · Structure of TRPC3 at 2.7 angstrom in high calcium state · the same entry in another collection · chain A against A, TM-score 1.00
Q13507 · AlphaFold monomer V2.0 prediction for short transient receptor potential channel 3… · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q13507
Elsewhere: RCSB PDB 7DXB · PDBe 7DXB · UniProt Q13507

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