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Non-heme monooxygenase, thoj-ni complex

Analyse Non-heme monooxygenase, thoj-ni complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6ZYK
Type
protein
Length
245 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Monooxygenase
UniProt
A0A1J4PXK4
Ligands
NI
Pockets
2 · best druggability 0.41

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMonooxygenaseprotein24535% helix, 27% strandA0A1J4PXK4

Ligands and binding sites

  • NI · Nickel (II) ion · metal · chains A
  • TLA · L(+)-tartaric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1500.410.8213NI, TLA
21050.400.7617empty

Compared structures

  • 6ZYK · Non-heme monooxygenase, ThoJ-Ni complex · the same entry in another collection · chain A against A, TM-score 1.00

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