Research workbench
Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA
Analyse Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1OLN
- Type
- protein + RNA
- Length
- 208 residues
- Chains
- 3
- Method
- solution nmr; theoretical model
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P29395, P0C8P8
Structure
solution nmr; theoretical model · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 133 | — | P29395 |
| B | — | protein | 17 | — | P0C8P8 |
| C | — | rna | 58 | — | — |
Compared structures
- 1MMS · Crystal structure of the ribosomal protein L11-RNA complex · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1OLN · Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA · the same entry in another collection · chain B against B, TM-score 1.00
- 1MMS · Crystal structure of the ribosomal PROTEIN L11-RNA complex · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1EG0 · Fitting of components with known structure into an 11.5 a cryo-EM MAP of the E.COLI 70S… · an experimental structure of the same protein · chain A against K, TM-score 1.00
- 1EG0 · Fitting of components with known structure into an 11.5 a cryo-EM MAP of the E.COLI 70S… · an experimental structure of the same protein · chain A against K, TM-score 1.00
- 1PN7 · Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the… · an experimental structure of the same protein · chain A against L, TM-score 1.00
- 1MVR · Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus… · an experimental structure of the same protein · chain A against L, TM-score 1.00
- 1PN8 · Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately… · an experimental structure of the same protein · chain A against L, TM-score 1.00
- 1MVR · Decoding center & peptidyl transferase center from the X-ray structure of the thermus… · an experimental structure of the same protein · chain A against L, TM-score 1.00
- 1PN8 · Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately… · an experimental structure of the same protein · chain A against L, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29395
- Every structure of UniProt P0C8P8
- Elsewhere: RCSB PDB 1OLN · PDBe 1OLN · UniProt P29395 · AlphaFold DB P29395 · UniProt P0C8P8 · AlphaFold DB P0C8P8
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