ASPARTYL/ASPARAGINYL beta-hydroxylase (asph) oxygenase and tpr domains in complex with manganese, 4,4-dimethyl-2-oxoglutarate, and factor X substrate peptide FRAGMENT(39MER-4SER)

Structure

x-ray diffraction · 2 distinct chains.

Ligands and binding sites

• Q1W · 2,2-dimethyl-4-oxidanylidene-pentanedioic acid · ligand · chains A
• MN · Manganese (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 6YYY · Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
• Q12797 · AlphaFold monomer V2.0 prediction for ASPARTYL/ASPARAGINYL beta- hydroxylase (Q12797) · a predicted model of the same protein · chain A against A, TM-score 0.99
• P00742 · AlphaFold monomer V2.0 prediction for coagulation factor X (P00742) · a predicted model of the same protein · chain B against A, TM-score 0.23

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q12797
• Every structure of UniProt P00742
• Elsewhere: RCSB PDB 6YYY · PDBe 6YYY · UniProt Q12797 · UniProt P00742