Research workbench
Structure of SAMM50 lir bound to gabarap
Analyse Structure of SAMM50 lir bound to gabarap in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6YOP
- Type
- protein
- Length
- 133 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sorting and assembly machinery component 50 HOMOLOG,GAMMA- aminobutyric acid…
- UniProt
- Q9Y512, O95166
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sorting and assembly machinery component 50 HOMOLOG,GAMMA- aminobutyric acid receptor-associated protein | protein | 133 | 29% helix, 20% strand | Q9Y512, O95166 |
Compared structures
- 6YOP · Structure of SAMM50 LIR bound to GABARAP · the same entry in another collection · chain A against A, TM-score 1.00
- O95166 · AlphaFold monomer V2.0 prediction for gamma-aminobutyric acid receptor-associated protein… · a predicted model of the same protein · chain A against A, TM-score 0.87
- Q9Y512 · AlphaFold monomer V2.0 prediction for sorting and assembly machinery component 50 homolog… · a predicted model of the same protein · chain A against A, TM-score 0.33
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y512
- Every structure of UniProt O95166
- Elsewhere: RCSB PDB 6YOP · PDBe 6YOP · UniProt Q9Y512 · UniProt O95166
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.