Research workbench
Crystal structure of pnra from S. pneumoniae in complex with guanosine
Analyse Crystal structure of pnra from S. pneumoniae in complex with guanosine in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6YA3
- Type
- protein
- Length
- 1,323 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0H2UPF3
- Ligands
- GMP, NI
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, A, B | — | protein | 331 | — | A0A0H2UPF3 |
| D | — | protein | 330 | — | A0A0H2UPF3 |
Ligands and binding sites
- GMP · Guanosine · ligand · 4 copies · chains C, A, B, D
- NI · Nickel (II) ion · metal · 8 copies · chains C, A, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YA3 · Crystal structure of PnrA from S. pneumoniae in complex with guanosine · the same entry in another collection · chain C against C, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H2UPF3
- Elsewhere: RCSB PDB 6YA3 · PDBe 6YA3 · UniProt A0A0H2UPF3
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