Research workbench
Alpha-methyl-glucose-bound structure of marinomonas primoryensis PA14 carbohydrate-binding domain
Analyse Alpha-methyl-glucose-bound structure of marinomonas primoryensis PA14… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6XAQ
- Type
- protein
- Length
- 182 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Antifreeze protein
- UniProt
- A1YIY3
- Ligands
- GYP, CA
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Antifreeze protein | protein | 182 | 12% helix, 45% strand | A1YIY3 |
Ligands and binding sites
- GYP · methyl alpha-D-glucopyranoside · ligand · chains A
- CA · Calcium ion · metal · 8 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XAQ · Alpha-methyl-glucose-bound structure of Marinomonas primoryensis PA14… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1YIY3
- Elsewhere: RCSB PDB 6XAQ · PDBe 6XAQ · UniProt A1YIY3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.