Research workbench
3-25 Fab germline-reversion variant bound to an hcmv gb-derived peptide
Analyse 3-25 Fab germline-reversion variant bound to an hcmv gb-derived peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6UOE
- Type
- protein
- Length
- 451 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DOX5, P0DOX7, P06473
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | — | protein | 225 | — | P0DOX5 |
| L | — | protein | 214 | — | P0DOX7 |
| P | — | protein | 12 | — | P06473 |
Ligands and binding sites
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains L
- PEG · Di(hydroxyethyl)ether · additive · chains H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UOE · 3-25 Fab germline-reversion variant bound to an HCMV gB-derived peptide · the same entry in another collection · chain H against H, TM-score 1.00
- P0DOX7 · AlphaFold monomer V2.0 prediction for immunoglobulin kappa light chain (P0DOX7) · a predicted model of the same protein · chain L against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DOX5
- Every structure of UniProt P0DOX7
- Every structure of UniProt P06473
- Elsewhere: RCSB PDB 6UOE · PDBe 6UOE · UniProt P0DOX5 · UniProt P0DOX7 · UniProt P06473
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