Research workbench
Cryo electron microscopy structure of the ATP-gated rat P2X7 ion channel in the apo, closed state
Analyse Cryo electron microscopy structure of the ATP-gated rat P2X7 ion channel in the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6U9V
- Type
- protein
- Length
- 1,680 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q64663
- Ligands
- PLM, GDP, Q3G, NAG, GLC, ZN
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 560 | — | Q64663 |
Ligands and binding sites
- PLM · Palmitic acid · ligand · 18 copies · chains A, B, C
- GDP · Guanosine-5'-diphosphate · ligand · 3 copies · chains A, B, C
- Q3G · O-[(R)-[(2S)-2-(hexadecanoyloxy)-3-(octadecanoyloxy) propoxy](hydroxy)phosphoryl]-D-serine · ligand · 3 copies · chains A, B, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 21 copies · chains A, B, C
- GLC · alpha-D-glucopyranose · sugar · 6 copies · chains A, B, C
- ZN · Zinc ion · metal · 6 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6U9V · Cryo electron microscopy structure of the ATP-gated rat P2X7 ion channel in the apo… · the same entry in another collection · chain A against A, TM-score 1.00
- Q64663 · AlphaFold monomer V2.0 prediction for P2X purinoceptor 7 (Q64663) · a predicted model of the same protein · chain A against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q64663
- Elsewhere: RCSB PDB 6U9V · PDBe 6U9V · UniProt Q64663
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.