Research workbench
N-terminally truncated hyoscyamine 6-hydroxylase (TH6H) in complex with N-oxalylglycine and hyoscyamine
Analyse N-terminally truncated hyoscyamine 6-hydroxylase (TH6H) in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6TTN
- Type
- protein
- Length
- 300 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hyoscyamine 6 beta-hydroxylase
- UniProt
- Q6EZB3
- Ligands
- OGA, HYO, SR, NI, NA, UNX
- Pockets
- 1 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hyoscyamine 6 beta-hydroxylase | protein | 300 | 33% helix, 24% strand | Q6EZB3 |
Ligands and binding sites
- OGA · N-oxalylglycine · ligand · chains A
- HYO · [(1S,5R)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl] (2S)-3-hydroxy-2-phenylpropanoate · ligand · chains A
- SR · Strontium ion · metal · chains A
- NI · Nickel (II) ion · metal · chains A
- NA · Sodium ion · metal · chains A
- UNX · Unknown atom or ion · ion · 3 copies · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 393 | 0.80 | 0.88 | 52 | OGA, HYO, NI |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6TTN · N-terminally truncated hyoscyamine 6-hydroxylase (tH6H) in complex with N-oxalylglycine… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6EZB3
- Elsewhere: RCSB PDB 6TTN · PDBe 6TTN · UniProt Q6EZB3
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