Ligand · OGA
OGA · N-oxalylglycine
OGA, N-oxalylglycine (C4 H5 N O5, 147.1 g/mol), in the MolNFT structures on GenesisL1: bound in 373 records (308 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- OGA
- Formula
- C4 H5 N O5
- Class
- ligand
- Structures
- 373
- PDB entries
- 308
Binding sites
OGA in 373 structures; the first of them:
- 5A1F · Crystal structure of the catalytic domain of PLU1 in complex with N-oxalylglycine. · OGA A1756 · binds TYR488, PHE496, HIS499, GLU501, SER507, ASN509, LYS517, TRP519 and 3 more
- 5D9Y · Crystal structure of TET2-5fC complex · OGA A2001 · binds ARG1261, CYS1374, ALA1379, HIS1382, ASP1384, VAL1395, HIS1416, HIS1881 and 5 more
- 5FV3 · Crystal structure of human JARID1B construct c2 in complex with N- Oxalylglycine. · OGA A1770 · binds TYR488, PHE496, HIS499, GLU501, SER507, ASN509, LYS517, TRP519 and 2 more
- 5FWE · JMJD2A COMPLEXED WITH NI(II), NOG AND HISTONE H4(1-15)R3me2s PEPTIDE · OGA A1358 · binds TYR132, TYR177, PHE185, HIS188, GLU190, SER196, ASN198, LYS206 and 4 more
- 5JQY · Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with… · OGA A802 · binds TRP625, GLN627, SER668, MET670, HIS679, ARG688, HIS690, PHE719 and 6 more
- 5L9R · HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with N-oxalylglycine (NOG) · OGA A502 · binds MET299, TYR310, HIS313, ASP315, ILE327, TYR329, LEU343, HIS374 and 2 more
- 5LA9 · HIF prolyl hydroxylase 2 (PHD2-R281C/V314C) cross-linked to HIF-1alpha NODD-L397C/D412C… · OGA A502 · binds ARG252, MET299, TYR310, HIS313, ASP315, ILE327, TYR329, LEU343 and 4 more
- 5LAS · HIF prolyl hydroxylase 2 (PHD2-R281C/P317C/R396T) cross-linked to HIF-1alpha… · OGA A502 · binds ARG252, MET299, TYR310, HIS313, ASP315, ILE327, TYR329, LEU343 and 4 more
- 5LUN · Ethylene Forming Enzyme from Pseudomonas syringae pv. phaseolicola - P1 ultra-high… · OGA A402 · binds ARG171, LEU173, PHE175, ILE186, HIS189, ASP191, LEU206, HIS268 and 5 more
- 5LY2 · JMJD2A/ KDM4A COMPLEXED WITH NI(II), NOG AND Macrocyclic PEPTIDE Inhibitor CP2_R6Kme3… · OGA A503 · binds TYR132, TYR177, PHE185, HIS188, GLU190, SER196, ASN198, LYS206 and 5 more
- 5PH1 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09449a · OGA A403 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PH2 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09597a · OGA A403 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PH6 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09736a · OGA A403 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PH8 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09552a · OGA A403 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PHA · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09398a · OGA A403 · binds TYR136, PHE189, HIS192, GLU194, SER200, ASN202, LYS210, TRP212 and 2 more
- 5PHH · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09457a · OGA A403 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PHI · PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09480a · OGA A403 · binds TYR136, PHE189, HIS192, GLU194, SER200, ASN202, LYS210, TRP212 and 2 more
- 5PHO · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ILE201, ASN202 and 5 more
- 5PHP · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PHR · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PI5 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PI7 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PIA · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PIG · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PIJ · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PIL · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PIQ · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, PHE189, HIS192, GLU194, SER200, ASN202, LYS210, TRP212 and 2 more
- 5PJ2 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 3 more
- 5PJ6 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
- 5PJ8 · PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement… · OGA A404 · binds TYR136, TYR181, PHE189, HIS192, GLU194, SER200, ASN202, LYS210 and 4 more
Residues it binds most
HIS 453, TYR 396, ASN 377, SER 350, TRP 364, ALA 338, PHE 342, LYS 340, GLU 313, ARG 132 (residue and the binding sites it lines).
Found with
- ZN · Zinc ion
- SO4 · Sulfate ion
- NI · Nickel (II) ion
- EDO · 1,2-ethanediol
- MG · Magnesium ion
- MN · Manganese (II) ion
- GOL · Glycerol
- FE2 · Fe (II) ion
- FE · Fe (III) ion
- CL · Chloride ion
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol
- H3X · Methyl (3'~{A}~{R},4'~{S},5'~{S},5~{A}~{S},6~{S},7~{S}, 9~{A}~{R})-1,1,3'~{A},4',5~{A},7,7'-heptamethyl-3,6'-bis(oxidanylidene)spiro[4,5,7,8,9,9~{a}-hexahydrobenzo[c]oxepine-6,2'-4,5-dihydro-3~{H}-1-benzofuran]-5'-carboxylate
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.