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Crystal structure of the large ribosomal subunit from deinococcus radiodurans

Analyse Crystal structure of the large ribosomal subunit from deinococcus radiodurans in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1NKW
Type
protein + RNA
Length
6,306 residues
Chains
31
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9RXJ9, Q9RXK2, Q9RXK1, Q9RXJ0, Q9RSL3, Q9RY49, Q9RSS7, Q9RXY1, Q9RXJ2, Q9RSK9, Q9RXJ5, Q9RSJ5, Q9RSL2, Q9RWB4, Q9RSW7, Q9RY64, Q9RXJ7, Q9RXK0, Q9RXJ1, Q9RX88, Q9RY65, Q9RXJ4, Q9RSL0, Q9RW44, P49228, Q9RSS4, Q9RSH2, Q9RSW6, Q9RSK0

Structure

x-ray diffraction · 31 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
0—rna2766——
9—rna118——
A—protein270—Q9RXJ9
B—protein205—Q9RXK2
C—protein197—Q9RXK1
D—protein178—Q9RXJ0
E—protein177—Q9RSL3
F—protein52—Q9RY49
G—protein143—Q9RSS7
H—protein143—Q9RXY1
I—protein132—Q9RXJ2
J—protein141—Q9RSK9
K—protein124—Q9RXJ5
L—protein114—Q9RSJ5
M—protein111—Q9RSL2
N—protein125—Q9RWB4
O—protein117—Q9RSW7
P—protein100—Q9RY64
Q—protein130—Q9RXJ7
R—protein93—Q9RXK0
S—protein113—Q9RXJ1
T—protein223—Q9RX88
U—protein86—Q9RY65
W—protein65—Q9RXJ4
X—protein55—Q9RSL0
Y—protein73—Q9RW44
Z—protein58—P49228
1—protein53—Q9RSS4
2—protein46—Q9RSH2
3—protein63—Q9RSW6
4—protein35—Q9RSK0

Compared structures

  • 1NKW · Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans · the same entry in another collection · chain H against H, TM-score 1.00

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