Research workbench
Plasminogen binding group a streptococcal M protein
Analyse Plasminogen binding group a streptococcal M protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OG4
- Type
- protein
- Length
- 197 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00747, P49054
- Ligands
- SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 83 | — | P00747 |
| B | — | protein | 80 | — | P00747 |
| C | — | protein | 34 | — | P49054 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OG4 · plasminogen binding group A streptococcal M protein · the same entry in another collection · chain A against A, TM-score 1.00
- P00747 · AlphaFold monomer V2.0 prediction for plasminogen (P00747) · a predicted model of the same protein · chain B against A, TM-score 0.96
- P49054 · AlphaFold monomer V2.0 prediction for plasminogen-binding group a streptococcal M-like… · a predicted model of the same protein · chain C against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00747
- Every structure of UniProt P49054
- Elsewhere: RCSB PDB 6OG4 · PDBe 6OG4 · UniProt P00747 · UniProt P49054
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