Research workbench
Crystal structure of GPR52 ligand free form with rubredoxin fusion
Analyse Crystal structure of GPR52 ligand free form with rubredoxin fusion in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6LI2
- Type
- protein
- Length
- 347 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y2T5, P00268
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 347 | — | Q9Y2T5, P00268 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 11 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LI2 · Crystal structure of GPR52 ligand free form with rubredoxin fusion · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y2T5 · AlphaFold monomer V2.0 prediction for G-protein coupled receptor 52 (Q9Y2T5) · a predicted model of the same protein · chain A against A, TM-score 0.79
- P00268 · AlphaFold monomer V2.0 prediction for rubredoxin (P00268) · a predicted model of the same protein · chain A against A, TM-score 0.16
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y2T5
- Every structure of UniProt P00268
- Elsewhere: RCSB PDB 6LI2 · PDBe 6LI2 · UniProt Q9Y2T5 · UniProt P00268
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