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S-adenosylmethionine synthetase with ppi

Analyse S-adenosylmethionine synthetase with ppi in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1MXA
Type
protein
Length
377 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
S-adenosylmethionine synthetase
EC
2.5.1.6
UniProt
P0A817
Ligands
POP, MG, K, PO4

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AS-adenosylmethionine synthetase (EC 2.5.1.6)protein37733% helix, 25% strandP0A817

Ligands and binding sites

  • POP · Pyrophosphate 2- · ligand · chains A
  • MG · Magnesium ion · metal · 2 copies · chains A
  • K · Potassium ion · metal · 2 copies · chains A
  • PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1MXA · S-adenosylmethionine synthetase with ppi · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A817 · AlphaFold monomer V2.0 prediction for S-adenosylmethionine synthase (P0A817) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

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