Research workbench
Crystal structure of plasmodium falciparum actin I in the mg-ADP state
Analyse Crystal structure of plasmodium falciparum actin I in the mg-ADP state in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6I4E
- Type
- protein
- Length
- 473 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8I4X0, P13020
- Ligands
- ADP, CA, MG, SCN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 351 | — | Q8I4X0 |
| G | — | protein | 122 | — | P13020 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · chains A
- CA · Calcium ion · metal · 3 copies · chains A, G
- MG · Magnesium ion · metal
- SCN · Thiocyanate ion · ion · 2 copies · chains A
- BME · Beta-mercaptoethanol · additive · 2 copies · chains A, G
- BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6I4E · Crystal Structure of Plasmodium falciparum actin I in the Mg-ADP state · the same entry in another collection · chain A against A, TM-score 1.00
- Q8I4X0 · AlphaFold monomer V2.0 prediction for actin-1 (Q8I4X0) · a predicted model of the same protein · chain A against A, TM-score 0.98
- P13020 · AlphaFold monomer V2.0 prediction for gelsolin (P13020) · a predicted model of the same protein · chain G against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8I4X0
- Every structure of UniProt P13020
- Elsewhere: RCSB PDB 6I4E · PDBe 6I4E · UniProt Q8I4X0 · UniProt P13020
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