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KRAS-169 Q61H gppnhp + ppin-2

Analyse KRAS-169 Q61H gppnhp + ppin-2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6GQT
Type
protein
Length
983 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P01116
Ligands
GNP, F8N, MG

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein171—P01116
C—protein159—P01116
D—protein160—P01116
E—protein164—P01116
F—protein158—P01116

Ligands and binding sites

  • GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · 6 copies · chains A, B, C, D, E, F
  • F8N · ~{N}-(3-imidazol-1-ylpropyl)-4-[[3-(3-methoxyphenyl) phenyl]methyl]oxane-4-carboxamide · ligand · 4 copies · chains B, E, A, C, D, F
  • MG · Magnesium ion · metal · 6 copies · chains A, B, C, D, E, F
  • CIT · Citric acid · additive · 3 copies · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GQT · KRAS-169 Q61H gppnhp + ppin-2 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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