GL1X · GenesisL1 explorer

Research workbench

Crystallographic structure of the cyclic hexapeptide derived from the btci inhibitor bound to beta-trypsin in space group P 21 21 21

Analyse Crystallographic structure of the cyclic hexapeptide derived from the btci… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6EAX
Type
protein
Length
229 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cationic trypsin; Cys-thr-lys-ser-ile-cys
EC
3.4.21.4
UniProt
P00760
Ligands
J3D, CA

Structure

x-ray diffraction · 2 distinct chains · 10% helix, 34% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACationic trypsin (EC 3.4.21.4)protein22310% helix, 35% strandP00760
ICys-thr-lys-ser-ile-cysprotein60% helix, 17% strand—

Ligands and binding sites

  • J3D · N-carboxy-L-cysteine · ligand · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–I · 475 Ų buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 6EAX · Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor… · the same entry in another collection · chain A against A, TM-score 1.00
  • 1TNG · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1TNH · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1TNJ · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1TNK · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1TNL · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1TNI · Prediction of novel serine protease inhibitors · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.