Research workbench
3.9A cryo-EM structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein
Analyse 3.9A cryo-EM structure of murine antibody bound at a novel epitope of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6CXC
- Type
- protein
- Length
- 1,945 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03420, M1E1E4
- Ligands
- NAG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X, G, I | — | protein | 114 | — | — |
| Y, J, K | — | protein | 108 | — | — |
| A, E | — | protein | 73 | — | P03420, M1E1E4 |
| B | — | protein | 358 | — | P03420, M1E1E4 |
| C | — | protein | 72 | — | P03420, M1E1E4 |
| D | — | protein | 352 | — | P03420, M1E1E4 |
| F | — | protein | 351 | — | P03420, M1E1E4 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CXC · 3.9A Cryo-EM structure of murine antibody bound at a novel epitope of respiratory… · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03420
- Every structure of UniProt M1E1E4
- Elsewhere: RCSB PDB 6CXC · PDBe 6CXC · UniProt P03420 · UniProt M1E1E4
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