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Tetragonal thermolysin (295 K) in the presence of 50% mpd

Analyse Tetragonal thermolysin (295 K) in the presence of 50% mpd in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5UU7
Type
protein
Length
316 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P00800
Ligands
ZN, CA, CL

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein316—P00800

Ligands and binding sites

  • ZN · Zinc ion · metal · 7 copies · chains A
  • CA · Calcium ion · metal · 3 copies · chains A
  • CL · Chloride ion · ion · 4 copies · chains A
  • MRD · (4R)-2-methylpentane-2,4-diol · additive · 2 copies · chains A
  • MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
  • DMS · Dimethyl sulfoxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5UU7 · Tetragonal thermolysin (295 K) in the presence of 50% mpd · the same entry in another collection · chain A against A, TM-score 1.00

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