Research workbench
Structure of the A2A-STAR2-BRIL562-compound 4E complex at 1.86A obtained from in meso soaking experiments (24 hour soak).
Analyse Structure of the A2A-STAR2-BRIL562-compound 4E complex at 1.86A obtained from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5OM4
- Type
- protein
- Length
- 389 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P29274, P0ABE7
- Ligands
- OLA, CLR, T4E, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 389 | — | P29274, P0ABE7 |
Ligands and binding sites
- OLA · Oleic acid · ligand · 16 copies · chains A
- CLR · Cholesterol · ligand · 4 copies · chains A
- T4E · 4-(3-amino-5-phenyl-1,2,4-triazin-6-yl)-2-chlorophenol · ligand · chains A
- NA · Sodium ion · metal · chains A
- OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 11 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OM4 · Structure of the A2A-StaR2-bRIL562-Compound 4e complex at 1.86A obtained from in meso… · the same entry in another collection · chain A against A, TM-score 1.00
- P29274 · AlphaFold monomer V2.0 prediction for adenosine receptor A2A (P29274) · a predicted model of the same protein · chain A against A, TM-score 0.78
- P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29274
- Every structure of UniProt P0ABE7
- Elsewhere: RCSB PDB 5OM4 · PDBe 5OM4 · UniProt P29274 · UniProt P0ABE7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.