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Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (high resolution)

Analyse Crystal structure of USP30 in covalent complex with ubiquitin propargylamide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OHK
Type
protein
Length
379 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q70CQ3, P0CG47
Ligands
AYE, ZN

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein304—Q70CQ3
B—protein75—P0CG47

Ligands and binding sites

  • AYE · prop-2-en-1-amine · ligand · chains A, B
  • ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OHK · Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (high… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q70CQ3 · AlphaFold monomer V2.0 prediction for ubiquitin carboxyl-terminal hydrolase 30 (Q70CQ3) · a predicted model of the same protein · chain A against A, TM-score 0.98

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