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Plla lectin, trisaccharide complex

Analyse Plla lectin, trisaccharide complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5OFX
Type: protein
Length: 968 residues
Chains: 8
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q7N561
Ligands: FRU, GLC, GLA, CA

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E, F, G, H	—	protein	121	—	Q7N561

Ligands and binding sites

FRU · beta-D-fructofuranose · sugar · 7 copies · chains A, B, C, D, E, F, H
GLC · alpha-D-glucopyranose · sugar · 7 copies · chains A, B, C, D, E, F, H
GLA · alpha-D-galactopyranose · sugar · 7 copies · chains A, B, C, D, E, F, H
CA · Calcium ion · metal · 8 copies · chains A, B, C, D, E, F, G, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5OFX · Plla lectin, trisaccharide complex · the same entry in another collection · chain H against H, TM-score 1.00
Q7N561 · AlphaFold monomer V2.0 prediction for lectin a (Q7N561) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7N561
Elsewhere: RCSB PDB 5OFX · PDBe 5OFX · UniProt Q7N561

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