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Crystal structure of mouse protocadherin-15 EC9-10

Analyse Crystal structure of mouse protocadherin-15 EC9-10 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5KJ4
Type: protein
Length: 900 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q99PJ1
Ligands: CA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	228	—	Q99PJ1
C, D	—	protein	222	—	Q99PJ1

Ligands and binding sites

CA · Calcium ion · metal · 12 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KJ4 · Crystal Structure of Mouse Protocadherin-15 EC9-10 · the same entry in another collection · chain A against A, TM-score 1.00
Q99PJ1 · AlphaFold monomer V2.0 prediction for protocadherin-15 (Q99PJ1) · a predicted model of the same protein · chain A against A, TM-score 0.59

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99PJ1
Elsewhere: RCSB PDB 5KJ4 · PDBe 5KJ4 · UniProt Q99PJ1

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