Research workbench
The crystal of rhodanese domain of ygap treated with sodium thiosulfate
Analyse The crystal of rhodanese domain of ygap treated with sodium thiosulfate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5HPA
- Type
- protein
- Length
- 103 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Inner membrane protein ygap
- UniProt
- P55734
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inner membrane protein ygap | protein | 103 | 42% helix, 21% strand | P55734 |
Modifications
Observed in the structure: 1 modified (oxidation).
Compared structures
- 5HPA · The crystal of rhodanese domain of YgaP treated with sodium thiosulfate · the same entry in another collection · chain A against A, TM-score 1.00
- P55734 · AlphaFold monomer V2.0 prediction for inner membrane protein ygap (P55734) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55734
- Elsewhere: RCSB PDB 5HPA · PDBe 5HPA · UniProt P55734
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