Research workbench
Cooperative bio-metallic selectivity in a tailored protease enables creation of a C-C cross-coupling heckase
Analyse Cooperative bio-metallic selectivity in a tailored protease enables creation of… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ARD
- Type
- protein
- Length
- 269 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Subtilisin savinase
- EC
- 3.4.21.62
- UniProt
- P29600
- Ligands
- EI3, CA, NI, SO4
Structure
x-ray diffraction · 1 distinct chain · 30% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Subtilisin savinase (EC 3.4.21.62) | protein | 269 | 30% helix, 21% strand | P29600 |
Ligands and binding sites
- EI3 · 5-methyl-2-(5-methylpyridin-2-yl)pyridine · ligand · chains A
- CA · Calcium ion · metal · chains A
- NI · Nickel (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 5ARD · Cooperative bio-metallic selectivity in a tailored protease enables creation of a C-C… · the same entry in another collection · chain A against A, TM-score 1.00
- P29600 · AlphaFold monomer V2.0 prediction for subtilisin savinase (P29600) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29600
- Elsewhere: RCSB PDB 5ARD · PDBe 5ARD · UniProt P29600
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.