Research workbench

Crystal structure of human protocadherin-15 EC8-10

Analyse Crystal structure of human protocadherin-15 EC8-10 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4XHZ
Type: protein
Length: 333 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protocadherin-15
UniProt: Q96QU1
Ligands: CA, CL

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protocadherin-15	protein	333	7% helix, 41% strand	Q96QU1

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4XHZ · Crystal Structure of Human Protocadherin-15 EC8-10 · the same entry in another collection · chain A against A, TM-score 1.00
Q96QU1 · AlphaFold monomer V2.0 prediction for protocadherin-15 (Q96QU1) · a predicted model of the same protein · chain A against A, TM-score 0.65

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96QU1
Elsewhere: RCSB PDB 4XHZ · PDBe 4XHZ · UniProt Q96QU1

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.