Research workbench
Cw-type zinc finger of MORC3 in complex with the amino terminus of histone H3
Analyse Cw-type zinc finger of MORC3 in complex with the amino terminus of histone H3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4QQ4
- Type
- protein
- Length
- 112 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Morc family cw-type zinc finger protein 3; Histone H3.3
- UniProt
- Q14149, P84243
- Ligands
- ZN, UNX, CL
Structure
x-ray diffraction · 2 distinct chains · 11% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Morc family cw-type zinc finger protein 3 | protein | 48 | 13% helix, 19% strand | Q14149 |
| C, D | Histone H3.3 | protein | 8 | 0% helix, 50% strand | P84243 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A, B
- UNX · Unknown atom or ion · ion · 7 copies · chains A, B, C, D
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
3 interfaces between chains.
- A–C · 636 Ų buried · 16 hydrogen bonds · protein-protein
- B–D · 607 Ų buried · 14 hydrogen bonds · protein-protein
- A–B · 365 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (methylation).
Compared structures
- 4QQ4 · CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3 · the same entry in another collection · chain A against A, TM-score 1.00
- Q14149 · AlphaFold monomer V2.0 prediction for morc family cw-type zinc finger protein 3 (Q14149) · a predicted model of the same protein · chain A against A, TM-score 0.92
- P84243 · AlphaFold monomer V2.0 prediction for histone H3.3 (P84243) · a predicted model of the same protein · chain C against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14149
- Every structure of UniProt P84243
- Elsewhere: RCSB PDB 4QQ4 · PDBe 4QQ4 · UniProt Q14149 · UniProt P84243
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.