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Crystal Structure of the Human BRDG1/STAP-1 SH2 Domain in Complex with the NTAL pTyr136 Peptide
Analyse Crystal Structure of the Human BRDG1/STAP-1 SH2 Domain in Complex with the NTAL… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3MAZ
- Type
- protein
- Length
- 109 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- Molecule
- Signal-transducing adaptor protein 1; CheD family protein
- UniProt
- Q9ULZ2, Q9GZY6
Structure
x-ray diffraction · resolution 1.9 · 2 distinct chains · 22% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Signal-transducing adaptor protein 1 | protein | 99 | 24% helix, 31% strand | Q9ULZ2 |
| B | CheD family protein | protein | 10 | 0% helix, 0% strand | Q9GZY6 |
Ligands and binding sites
- MLI · Malonate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 783 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (phosphorylation).
Compared structures
- 3MAZ · Crystal structure of the human BRDG1/STAP-1 SH2 domain in complex with the ntal PTYR136… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9ULZ2 · AlphaFold monomer V2.0 prediction for signal-transducing adaptor protein 1 (Q9ULZ2) · a predicted model of the same protein · chain A against A, TM-score 0.95
- Q9GZY6 · AlphaFold monomer V2.0 prediction for linker for activation of T-cells family member 2… · a predicted model of the same protein · chain B against A, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ULZ2
- Every structure of UniProt Q9GZY6
- Elsewhere: RCSB PDB 3MAZ · PDBe 3MAZ · UniProt Q9ULZ2 · UniProt Q9GZY6
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