Ligand · MLI
MLI · Malonate ion
MLI, Malonate ion (C3 H2 O4 -2, 102.0 g/mol), in the MolNFT structures on GenesisL1: bound in 817 records (606 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- MLI
- Formula
- C3 H2 O4 -2
- Class
- additive
- Structures
- 817
- PDB entries
- 606
Binding sites
MLI in 817 structures; the first of them:
- 4XMW · Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with… · MLI A911 · binds LEU289, GLY335, SER336, VAL339, ASN340, ALA611, HIS672, ILE675 and 1 more
- 4XN5 · Crystal Structure of Met260Ala mutant of E. coli Aminopeptidase N in complex with… · MLI A910 · binds TYR668, ARG669, VAL670, GLU671
- 4XN7 · Crystal Structure of E. coli Aminopeptidase N in complex with L-2,3-Diaminopropionic acid · MLI A935 · binds LEU351, ASN623, GLY787, GLY791, SER792
- 5A4P · Structure of UBE2Z provides functional insight into specificity in the FAT10 conjugation… · MLI A1328 · binds GLY171, THR174, VAL175, ARG250, VAL251, ASP255
- 5A5F · Crystal structure of murd ligase from escherichia COLI in complex with uma and ADP · MLI A500 · binds THR321, LYS348, ALA414, SER415, LEU416, ASN421, PHE422, ARG425
- 5AG2 · SOD-3 azide complex · MLI A1196 · binds ASN167, VAL168, PRO170
- 5C2T · Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with… · MLI A701 · binds GLN84, GLY85, PHE153, HIS276, LEU286, THR288, GLU289, GLY290 and 5 more
- 5CVY · The Structure of Bacillus pumilus GH48 in complex with cellobiose and cellohexaose · MLI A804 · binds GLN180, THR375, SER377, TRP378, ASN379, GLY380, GLU398, HIS404
- 5E5R · Crystal structure of the complex between Carbonic anhydrase-like domain of PTPRG and… · MLI A401 · binds TRP116, GLU230, THR231, PHE232
- 5E9H · Structural insights of isocitrate lyases from Fusarium graminearum · MLI A602 · binds SER106, TRP108, ASP123, CYS215, HIS217, ARG252, ASN432, SER434 and 5 more
- 5E9P · Spirochaeta thermophila X module - CBM64 - wildtype · MLI A601 · binds PHE481, SER482, THR483, ASP484
- 5EBB · Structure of human sphingomyelinase phosphodiesterase like 3A (SMPDL3A) with Zn2+ · MLI A706 · binds ASP45, HIS47, ASP110, HIS114, ASN151, HIS152, TYR214, HIS252 and 2 more
- 5EBE · Structure of human sphingomyelinase phosphodiesterase like 3A (SMPDL3A) with 5' CMP · MLI B610 · binds SER165, LYS166, ASN169
- 5ECU · The unliganded structure of Caldicellulosiruptor saccharolyticus GH5 · MLI A633 · binds VAL332, PRO333, ILE335, SER358, ILE359, ARG378
- 5EUM · 1.8 Angstrom Crystal Structure of ATP-binding Component of Fused Lipid Transporter… · MLI A608 · binds PHE467, GLN490, ARG493
Residues it binds most
HIS 729, ASP 667, ARG 617, GLY 411, LEU 388, SER 326, THR 344, LYS 302, ALA 321, TYR 280 (residue and the binding sites it lines).
Found with
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