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NMR structure of the gamma subunit of cGMP phosphodiesterase

Analyse NMR structure of the gamma subunit of cGMP phosphodiesterase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JU4
Type: protein
Length: 87 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: NOT
Source: Bos taurus
Molecule: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
EC: 3.1.4.17
UniProt: P04972
Ligands: RCY

Structure

solution nmr · resolution NOT · 1 distinct chain · 8% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma (EC 3.1.4.17)	protein	87	8% helix, 0% strand	P04972

Ligands and binding sites

RCY · (3'R)-1'-oxyl-2',2',5',5'-tetramethyl-1,3'-bipyrrolidine-2,5-dione · ligand · 10 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 15 covalent (covalent ligand).

Compared structures

2JU4 · NMR structure of the gamma subunit of cgmp phosphodiesterase · the same entry in another collection · chain A against A, TM-score 1.00
P04972 · AlphaFold monomer V2.0 prediction for retinal rod rhodopsin-sensitive cgmp 3',5'-cyclic… · a predicted model of the same protein · chain A against A, TM-score 0.25

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P04972
Elsewhere: RCSB PDB 2JU4 · PDBe 2JU4 · UniProt P04972

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