MolNFT v1 · #41658 · protein
NMR structure of the gamma subunit of cgmp phosphodiesterase
2JU4 · Retinal rod rhodopsin-sensitive cgmp 3',5'-cyclic…: “NMR structure of the gamma subunit of cgmp phosphodiesterase”. Solution nmr, 1 ligand (RCY). MolNFT v1 #41658 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2JU4
- Type
- protein
- Length
- 87 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Retinal rod rhodopsin-sensitive cgmp 3',5'-cyclic phosphodiesterase subunit gamma
- EC
- 3.1.4.17
- UniProt
- P04972
- Ligands
- RCY
Structure
solution nmr · 1 distinct chain · 8% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Retinal rod rhodopsin-sensitive cgmp 3',5'-cyclic phosphodiesterase subunit gamma (EC 3.1.4.17) | protein | 87 | 8% helix, 0% strand | P04972 |
Ligands and binding sites
- RCY · (3'R)-1'-oxyl-2',2',5',5'-tetramethyl-1,3'-bipyrrolidine-2,5-dione · ligand · 10 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 15 covalent (covalent ligand).
Compared structures
- 2JU4 · NMR structure of the gamma subunit of cGMP phosphodiesterase · the same entry in another collection · chain A against A, TM-score 1.00
- P04972 · AlphaFold monomer V2.0 prediction for retinal rod rhodopsin-sensitive cgmp 3',5'-cyclic… · a predicted model of the same protein · chain A against A, TM-score 0.25
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04972
- Elsewhere: RCSB PDB 2JU4 · PDBe 2JU4 · UniProt P04972
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