Research workbench

Chicken villin subdomain HP-35, K65(NLE), N68H, pH5.1

Analyse Chicken villin subdomain HP-35, K65(NLE), N68H, pH5.1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WY4
Type: protein
Length: 35 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.55
Molecule: Villin
UniProt: P02640
Ligands: NA, IOD

Structure

x-ray diffraction · resolution 1.55 · 1 distinct chain · 71% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Villin	protein	35	71% helix, 0% strand	P02640

Ligands and binding sites

NA · Sodium ion · metal
IOD · Iodide ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 modified (nonstandard).

Compared structures

1WY4 · Chicken villin subdomain hp-35, K65(NLE), N68H, PH5.1 · the same entry in another collection · chain A against A, TM-score 1.00
P02640 · AlphaFold monomer V2.0 prediction for villin-1 (P02640) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02640
Elsewhere: RCSB PDB 1WY4 · PDBe 1WY4 · UniProt P02640

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