MolNFT v1 · #26732 · protein

Chicken villin subdomain hp-35, K65(NLE), N68H, PH5.1

1WY4: “Chicken villin subdomain hp-35, K65(NLE), N68H, PH5.1”. X-ray diffraction, 2 ligands (NA, IOD). MolNFT v1 #26732 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1WY4
Type: protein
Length: 35 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Villin
UniProt: P02640
Ligands: NA, IOD

Structure

x-ray diffraction · 1 distinct chain · 71% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Villin	protein	35	71% helix, 0% strand	P02640

Ligands and binding sites

NA · Sodium ion · metal
IOD · Iodide ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 modified (nonstandard).

Compared structures

1WY4 · Chicken villin subdomain HP-35, K65(NLE), N68H, pH5.1 · the same entry in another collection · chain A against A, TM-score 1.00
P02640 · AlphaFold monomer V2.0 prediction for villin-1 (P02640) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02640
Elsewhere: RCSB PDB 1WY4 · PDBe 1WY4 · UniProt P02640

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