Research workbench
Crystal structure of human VISTA extracellular domain
Analyse Crystal structure of human VISTA extracellular domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OIL
- Type
- protein
- Length
- 148 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.85
- Source
- Homo sapiens
- Molecule
- V-type immunoglobulin domain-containing suppressor of T-cell activation
- UniProt
- Q9H7M9
- Ligands
- NAG
Structure
x-ray diffraction · resolution 1.85 · 1 distinct chain · 9% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | V-type immunoglobulin domain-containing suppressor of T-cell activation | protein | 148 | 9% helix, 53% strand | Q9H7M9 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 3 disulfide, 2 glycan (disulfide, N-glycosylation).
Compared structures
- 6OIL · Crystal structure of human vista extracellular domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H7M9 · AlphaFold monomer V2.0 prediction for V-type immunoglobulin domain- containing suppressor… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H7M9
- Elsewhere: RCSB PDB 6OIL · PDBe 6OIL · UniProt Q9H7M9
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